Publications New

Oct 2, 2020 Cell

Key parameters of tumor epitope immunogenicity revealed through a consortium approach improve neoantigen prediction

Wells DK, van Buuren MM, Dang KK, Hubbard-Lucey VM, Sheehan KCF, Campbell KM, Lamb A, Ward JP, Sidney J, Blazquez AB, Rech AJ, Zaretsky JM, Comin-Anduix B, Ng AHC, Chour W, Yu TV, Rizvi H, Chen JM, Manning P, Steiner GM, Doan XC; Tumor Neoantigen Selection Alliance, Merghoub T, Guinney J, Kolom A, Selinsky C, Ribas A, Hellmann MD, Hacohen N, Sette A, Heath JR, Bhardwaj N, Ramsdell F, Schreiber RD, Schumacher TN, Kvistborg P, Defanoux NA

Oct 1, 2020 Cell

Lifted Up from Lockdown

Arturo EC, Saphire EO

Sep 30, 2020 Front Public Health

Corona Pandemic: Assisted Isolation and Care to Protect Vulnerable Populations May Allow Us to Shorten the Universal Lock-Down and Gradually Re-open Society

Ludvigsson J, von Herrath MG, Mallone R, Buschard K, Cilio C, Craig M, Ilonen J, Leslie D, McGeoch JEM, Schneider D, Skyler JS, Flodström Tullberg M, Hober D.

Sep 30, 2020 J Virol

Identification and characterization of CD4+ T cell epitopes after Shingrix vaccination

Voic H, de Vries RD, Sidney J, Rubiro P, Moore E, Philllips E, Mallal S, Schwan B, Weiskopf D, Sette A, Grifoni A

Sep 30, 2020 Genome Biol.

Mustache: multi-scale detection of chromatin loops from Hi-C and Micro-C maps using scale-space representation.

Roayaei Ardakany A, Gezer HT, Lonardi S, Ay F.

Sep 29, 2020 Proc Natl Acad Sci

Lack of evidence for BCG vaccine protection from severe COVID-19

Lindestam Arlehamn CS, Sette A, Peters B

Sep 29, 2020 Circulation

Pathogenic Autoimmunity in Atherosclerosis Evolves From Initially Protective Apolipoprotein B100-Reactive CD4(+) T-Regulatory Cells

Wolf D, Gerhardt T, Winkels H, Michel NA, Pramod AB, Ghosheh Y, Brunel S, Buscher K, Miller J, McArdle S, Baas L, Kobiyama K, Vassallo M, Ehinger E, Dileepan T, Ali A, Schell M, Mikulski Z, Sidler D, Kimura T, Sheng X, Horstmann H, Hansen S, Mitre LS, Stachon P, Hilgendorf I, Gaddis DE, Hedrick C, Benedict CA, Peters B, Zirlik A, Sette A, Ley K

Sep 28, 2020 Clin Transl Immunol

Disease extent and anti-tubercular treatment response correlates with Mycobacterium tuberculosis-specific CD4 T-cell phenotype regardless of HIV-1 status

Riou C, Du Bruyn E, Ruzive S, Goliath RT, Lindestam Arlehamn CS, Sette A, Sher A, Barber DL, Wilkinson RJ

Sep 28, 2020 Cytokine

Lack of evidence supporting a role of IFN-b and TGF-b iin differential polarization of Bordetella pertussis specific-T cell responses

da Silva Antunes R, Quiambao LG, Soldevila F, Sutherland A, Peters B, Sette A

Sep 21, 2020 J Immunol

TL1A Promotes Lung Tissue Fibrosis and Airway Remodeling

Herro R, Miki H, Sethi GS, Mills D, Mehta AK, Nguyen XX, Feghali-Bostwick C, Miller M, Broide DH, Soloff R, Croft M

Sep 17, 2020 Blood

TET family dioxygenases and the TET activator vitamin C in immune responses and cancer

Yue, X, Rao A

Sep 16, 2020 Cell

Antigen-specific adaptive immunity to SARS-CoV-2 in acute COVID-19 and associations with age and disease severity

Rydyznski Moderbacher C, Ramirez SI, Dan JM, Grifoni A, Hastie KM, Weiskopf D, Belanger S, Abbott RK, Kim C, Choi J, Kato Y, Crotty EG, Kim C, Rawlings SA, Mateus J, Tse LPV, Frazier A, Baric R, Peters B, Greenbaum J, Ollmann Saphire E, Smith DM, Sette A, Crotty S