Publications New

Mar 31, 2024 Arthritis Rheumatol

Laser capture microscopy (LCM)-RNAseq for topological mapping of synovial pathology during rheumatoid arthritis.

Van Espen B, Prideaux EB, Wilson AR, Machado CRL, Sendo S, Parker J, Seumois G, Sacchetti C, Belongia AC, Perumal NB, Vijayanand P, Linnik MD, Benschop RJ, Wang W, Bottini N, Firestein GS, Stanford SM.

Mar 31, 2024 Open Forum Infect Dis

Exacerbation of CMV and Nontuberculous Mycobacterial infections following PD-1 blockade for HIV-associated kaposi sarcoma

Anidi IU, Sakai S, Brooks K, Fling SP, Wagner MJ, Lurain K, Lindestam Arlehamn CS, Sette A, Knox KS, Brenchley JM, Uldrick TS, Sharon E, Barber DL

Mar 26, 2024 Diabetes

Epistasis Between HLA-DRB1*16:02:01 and SLC16A11 T-C-G-T-T Reduces Odds for Type 2 Diabetes in Southwest American Indians.

Williams RC, Hanson RL, Peters B, Kearns K, Knowler WC, Bogardus C, Baier LJ.

Mar 25, 2024 bioRxiv

Functional Diversity of Memory CD8 T Cells is Spatiotemporally Imprinted

Reina-Campos M, Monell A, Ferry A, Luna V, Cheung KP, Galletti G, Scharping NE, Takehara KK, Quon S, Boland B, Lin YH, Wong WH, Indralingam CS, Yeo GW, Chang JT, Heeg M, Goldrath AW.

Mar 25, 2024 Cell Rep Methods

A multi-omics systems vaccinology resource to develop and test computational models of immunity

Shinde P, Soldevila F, Reyna J, Aoki M, Rasmussen M, Willemsen L, Kojima M, Ha B, Greenbaum JA, Overton JA, Guzman-Orozco H, Nili S, Orfield S, Gygi JP, da Silva Antunes R, Sette A, Grant B, Olsen LR, Konstorum A, Guan L, Ay F, Kleinstein SH, Peters B.

Mar 14, 2024 bioRxiv [Preprint] Update in: Cell Rep Methods

A systems vaccinology resource to develop and test computational models of immunity

Mar 13, 2024 J Infect Dis

Mpox-specific immune responses elicited by vaccination or infection in people living with HIV

Grüner E, Grossegesse M, Stern D, Ober V, Eser TM, Reiling G, Stirner R, Ibarra G, Postel N, Conca R, Dächert C, Grifoni A, Sette A, Bogner J, Seybold U, Roider J

Mar 11, 2024 Front Immunol

Identification of mouse CD4+ T cell epitopes in SARS-CoV-2 BA.1 spike and nucleocapsid for use in peptide:MHCII tetramers

Bricio-Moreno L, Barreto de Albuquerque J, Neary JM, Nguyen T, Kuhn LF, Yeung Y, Hastie KM, Landeras-Bueno S, Olmedillas E, Hariharan C, Nathan A, Getz MA, Gayton AC, Khatri A, Gaiha GD

Mar 9, 2024 bioRxiv

Protein complex heterogeneity and topology revealed by electron capture charge reduction and surface induced dissociation

Shaw J, Harvey S, Du C, Xu Z, Olmedillas E, Saphire EO, Wysocki VH

Mar 8, 2024 Cell Rep Methods

A multi-omics systems vaccinology resource to develop and test computational models of immunity

Mar 6, 2024 bioRxiv

High-parameter phenotypic characterization reveals a subset of human Th17 cells that preferentially produce IL17 against M. tuberculosis antigen

Ogongo P, Tran A, Marzan F, Gingrich D, Krone M, Aweeka F, Lindestam Arlehamn CS, Martin JN, Deeks SG, Hunt PW, Ernst JD

Mar 6, 2024 bioRxiv [Preprint]

Rare Variable M. tuberculosis Antigens induce predominant Th17 responses in human infection.

Ogongo P, Wassie L, Tran A, Columbus D, Sharling L, Ouma G, Ouma SG, Bobosha K, Lindestam Arlehamn CS, Gandhi NR, Auld SC, Rengarajan J, Day CL, Altman JD, Blumberg HM, Ernst JD; TBRU ASTRa Study Group.