Publications New

Jan 1, 2018 Database (Oxford)

FAIR principles and the IEDB: short-term improvements and a long-term vision of OBO-foundry mediated machine-actionable interoperability

Vita R, Overton JA, Mungall CJ, Sette A, Peters B

Jan 1, 2018 Database (Oxford)

Identification of errors in the IEDB using ontologies

Vita R, Overton JA, Peters B

Jan 1, 2018 Hum Immunol

Sequence-based HLA-A, B, C, DP, DQ, and DR typing of 339 adults from Managua, Nicaragua

Weiskopf D, Grifoni A, Arlehamn CSL, Angelo M, Leary S, Sidney J, Frazier A, Mack SJ, Phillips E, Mallal S, Cerpas C, Balmaseda A, Harris E, Sette A

Jan 1, 2018 Methods Mol Biol

An integrated and semiautomated microscaled approach to profile cis-regulatory elements by histone modification ChIP-Seq for large-scale epigenetic studies

Youhanna Jankeel D, Cayford J, Schmiedel BJ, Vijayanand P, Seumois G

Jan 1, 2018 Methods Mol Biol

A sensitive and integrated approach to profile messenger RNA from samples with low cell numbers

Rosales SL, Liang S, Engel I, Schmiedel BJ, Kronenberg M, Vijayanand P, Seumois G

Jan 1, 2018 Methods Mol Biol

A sensitive and integrated approach to profile messenger RNA from samples with low cell numbers

Rosales SL, Liang S, Engel I, Schmiedel BJ, Kronenberg M, Vijayanand P, Seumois G

Dec 26, 2017 Cell Rep

Effector and regulatory T cells roll at high shear stress by inducible tether and sling formation

Abadier M, Pramod AB, McArdle S, Marki A, Fan Z, Gutierrez E, Groisman A, Ley K

Dec 21, 2017 PLoS Negl Trop Dis

Ontogeny of the B- and T-cell response in a primary Zika virus infection of a dengue-naïve individual during the 2016 outbreak in Miami, FL

Ricciardi MJ, Magnani DM, Grifoni A, Kwon YC, Gutman MJ, Grubaugh ND, Gangavarapu K, Sharkey M, Silveira CGT, Bailey VK, Pedreño-Lopez N, Gonzalez-Nieto L, Maxwell HS, Domingues A, Martins MA, Pham J, Weiskopf D, Altman J, Kallas EG, Andersen KG, Stevenson M, Lichtenberger P, Choe H, Whitehead SS, Sette A, Watkins DI

Dec 19, 2017 Front Cardiovasc Med

Patrolling mechanics of non-classical monocytes in vascular inflammation

Buscher K, Marcovecchio P, Hedrick CC, Ley K

Dec 15, 2017 Clin Cancer Res

Head and neck squamous cell carcinomas are characterized by a stable immune signature within the primary tumor over time and space

Wood O, Clarke J, Woo J, Mirza AH, Woelk CH, Thomas GJ, Vijayanand P, King EV, Ottensmeier CH

Dec 14, 2017 Nature

Runx3 programs CD8+ T cell residency in non-lymphoid tissues and tumours

Milner JJ, Toma C, Yu B, Zhang K, Omilusik K, Phan AT, Wang D, Getzler AJ, Nguyen T, Crotty S, Wang W, Pipkin ME, Goldrath AW

Dec 7, 2017 JCI Insight

Requirement of Treg-intrinsic CTLA4/PKCη signaling pathway for suppressing tumor immunity

Pedros C, Canonigo-Balancio AJ, Kong KF, Altman A