Publications

All Altman Ay Benedict Cheroutre Croft Crotty Einav Eschweiler Grifoni Hedrick Hogan Kawakami Kronenberg Ley Lindestam Lisdestam Arlehamn Myers Pandurangan Peters Rao Reina Saphire Schmiedel Schoenberger Sette Seumois Sharma Shresta Vijayanand Von Herrath Weiskopf

Jun 01, 2018

Cytometry A

DAFi: a directed recursive data filtering and clustering approach for improving and integrating data clustering identification of cell populations from polychromatic flow cytometry data

Lee AJ, Chang I, Burel JG, Lindestam Arlehamn CS, Mandava A, Weiskopf D, Peters B, Sette A, Scheuermann RH, Qian Y

Jun 01, 2018

Proteomics

Minimal information about an immune-peptidomics experiment (MIAIPE)

Lill JR, van Veelen PA, Tenzer S, Admon A, Caron E, Elias J, Heck AJR, Marcilla M, Marino F, Muller M, Peters B, Purcell A, Sette A, Sturm T, Ternette N, Vizcaino JA, Bassani-Sternberg M

May 14, 2018

PLoS One

The effect of acylation with fatty acids and other modifications on HLA class II:peptide binding and T cell stimulation for three model peptides

Schultz HS, Ostergaard S, Sidney J, Lamberth K, Sette A

May 07, 2018

PLoS One

Microbiota epitope similarity either dampens or enhances the immunogenicity of disease-associated antigenic epitopes

Carrasco Pro S, Lindestam Arlehamn CS, Dhanda SK, Carpenter C, Lindvall M, Faruqi AA, Santee CA, Renz H, Sidney J, Peters B, Sette A

Apr 26, 2018

Front Immunol

Urinary peptides as a novel source of T cell allergen epitopes

da Silva Antunes R, Pham J, McMurtrey C, Hildebrand WH, Phillips E, Mallal S, Sidney J, Busse P, Peters B, Schulten V, Sette A

Mar 27, 2018

Circulation

Regulatory CD4+ T cells recognize MHC-II-restricted peptide epitopes of apolipoprotein B

Kimura T, Kobiyama K, Winkels H, Tse K, Miller J, Vassallo M, Wolf D, Ryden C, Orecchioni M, Dileepan T, Jenkins MK, James EA, Kwok WW, Hanna DB, Kaplan RC, Strickler HD, Durkin HG, Kassaye SG, Karim R, Tien PC, Landay AL, Gange SJ, Sidney J, Sette A, Ley K

Mar 21, 2018

BMC Immunol

Low HLA binding of diabetes-associated CD8+ T-cell epitopes is increased by post ranslational modifications

Sidney J, Vela JL, Friedrich D, Kolla R, von Herrath M, Wesley JD, Sette A

Mar 01, 2018

Hum Immunol

Sequence-based HLA-A, B, C, DP, DQ, and DR typing of 159 individuals from the Worcester region of the Western Cape province of South Africa

Grifoni A, Sidney J, Carpenter C, Phillips E, Mallal S, Scriba TJ, Sette A, Lindestam Arlehamn CS

Feb 22, 2018

J Clin Microbiol

Development of envelope protein antigens to serologically differentiate Zika from dengue virus infection

Premkumar L, Collins M, Graham S, Liou GA, Lopez CA, Jadi R, Balmaseda A, Brackbill JA, Dietze R, Camacho E, De Silva AD, Giuberti C, Dos Reis HL, Singh T, Heimsath H, Weiskopf D, Sette A, Osorio JE, Permar SR, Miley MJ, Lazear HM, Harris E, de Silva AM

Feb 13, 2018

Front Immunol

Allergen and epitope targets of mouse-specific T cell responses in allergy and asthma

Schulten V, Westernberg L, Birrueta G, Sidney J, Paul S, Busse P, Peters B, Sette A

Feb 01, 2020

Immunogenetics

The Immune Epitope Database and Analysis Resource Program 2003-2018: reflections and outlook

Martini S, Nielsen M, Peters B, Sette A

Feb 01, 2018

Hum Immunol

Sequence-based HLA-A, B, C, DP, DQ, and DR typing of 714 adults from Colombo, Sri Lanka

Moore E, Grifoni A, Weiskopf D, Schulten V, Arlehamn CSL, Angelo M, Pham J, Leary S, Sidney J, Broide D, Frazier A, Phillips E, Mallal S, Mack SJ, Sette A