Publications

Jul 2, 2019 Nucleic Acids Res

IEDB-AR: immune epitope database – analysis resource in 2019

Dhanda SK, Mahajan S, Paul S, Yan Z, Kim H, Closter Jespersen M, Jurtz V, Andreatta M, Greenbaum JA, Marcatili P, Sette A, Nielsen M, Peters B

Jul 1, 2019 J Immunol

Widespread Tau-specific CD4 T cell reactivity in the general population

Lindestam Arlehamn CS, Pham J, Alcalay RN, Frazier A, Shorr E, Carpenter C, Sidney J, Shanwani R, Agin-Liebes J, Garretti F, Amara AW, Standaert DG, Phillips EJ, Mallal SA, Peters B, Sulzer D, Sette A

Jun 26, 2019 Mol Cell Proteomics

MOGSA: integrative single sample gene-set analysis of multiple omics data

Meng C, Basunia A, Peters B, Moghaddas Gholami A, Kuster B, Culhane AC

Jun 25, 2019 Elife

Circulating T cell-monocyte complexes are markers of immune perturbations

Burel JG, Pomaznoy M, Lindestam Arlehamn CS, Weiskopf D, da Silva Antunes R, Jung Y, Babor M, Schulten V, Seumois G, Greenbaum JA, Premawansa S, Premawansa G, Wijewickrama A, Vidanagama D, Gunasena B, Tippalagama R, deSilva AD, Gilman RH, Saito M, Taplitz R, Ley K, Vijayanand P, Sette A, Peters B

Apr 25, 2019 BMC Bioinformatics

Reporting and connecting cell type names and gating definitions through ontologies

Overton JA, Vita R, Dunn P, Burel JG, Bukhari SAC, Cheung KH, Kleinstein SH, Diehl AD, Peters B

Apr 20, 2019 World Allergy Organ J

Characterization and epitope identification of the T cell response in non-allergic individuals exposed to mouse allergen

Grifoni A, da Silva Antunes R, Westernberg L, Pham J, Birrueta G, Peters B, Sette A, Schulten V

Mar 18, 2019 J Clin Invest

Dengue-specific CD8+ T cell subsets display specialized transcriptomic and TCR profiles

Tian Y, Babor M, Lane J, Seumois G, Liang S, Goonawardhana NDS, De Silva, AD, Phillips E, Mallal SA, da Silva Antunes R, Grifoni A, Vijayanand P, Weiskopf D, Peters B, Sette A

Feb 27, 2019 Front Immunol

Variability in german cockroach extract composition greatly impacts T cell potency in cockroach-allergic donors

Birrueta G, Frazier A, Pomes A, Glesner J, Filep S, Schal C, Jeong KY, McMurtrey C, Vander Schans T, Hildebrand WH, Busse PM, Beigelman A, Peters B, Sette A, Schulten V

Feb 26, 2019 Front Immunol

Antibody specific B-cell epitope predictions: leveraging information from antibody-antigen protein complexes

Jespersen MC, Mahajan S, Peters B, Nielsen M, Marcatili P

Feb 19, 2019 Front Immunol

Host transcriptomics as a tool to identify diagnostic and mechanistic immune signatures of tuberculosis

Burel JG, Babor M, Pomaznoy M, Lindestam Arlehamn CS, Khan N, Sette A, Peters B

Feb 19, 2019 Proc Natl Acad Sci U S A

Most viral peptides displayed by class I MHC on infected cells are immunogenic

Croft NP, Smith SA, Pickering J, Sidney J, Peters B, Faridi P, Witney MJ, Sebastian P, Flesch IEA, Heading SL, Sette A, La Gruta NL, Purcell AW, Tscharke DC

Jan 8, 2019 Nucleic Acids Res

The immune epitope database (IEDB): 2018 update

Vita R, Mahajan S, Overton JA, Dhanda SK, Martini S, Cantrell JR, Wheeler DK, Sette A, Peters B