Saphire Lab

Erica Ollmann Saphire, Ph.D., MBA

Professor, President & Chief Executive Officer

Center for Autoimmunity and Inflammation
Center for Cancer Immunotherapy
Center for Sex-based Differences in the Immune System
Center for Vaccine Innovation

The beauty of structural biology is that it gives you the ability to dissect the molecular details at high resolution to explain precisely how something works.

Overview

Erica Ollmann Saphire, Ph.D., MBA, is a Professor of the La Jolla Institute for Immunology. Her research explains, at the molecular level, how and why viruses are pathogenic and provides the roadmap for medical defense. Her team has solved the structures of the Ebola, Sudan, Marburg, Bundibugyo and Lassa virus glycoproteins, explained how they remodel these structures as they drive themselves into cells, how their proteins suppress immune function and where human antibodies can defeat these viruses.

Prof. Saphire is currently leading a Bill & Melinda Gates Foundation-supported consortium to evaluate antibody therapeutics against SARS-CoV-2 to prevent and treat COVID-19. This consortium, CoVIC (covic.lji.org) analyzes the world’s leading therapeutic candidates side-by-side, and uses LJI’s powerful pair of Titan Krios microscopes for high-resolution analysis of the antibody interactions.

She was also the galvanizing force behind the Viral Hemorrhagic Fever Immunotherapeutic Consortium and is directing this NIAID-supported organization. This consortium, Center of Excellence in Translational Research, unites 44 previously competing academic, industrial and government labs across five continents to understand and provide antibody therapeutics against Ebola, Marburg, Lassa and other viruses. A recent discovery from Instructor Kathryn Hastie revealed why neutralizing antibodies had been so difficult to elicit against Lassa virus, and provided not only the templates for the needed vaccine, but the molecule itself: a Lassa surface glycoprotein engineered to remain in the right conformation to inspire the needed antibody response. This molecule is the basis for international vaccine efforts against Lassa. Other work in their lab reveals how these and other viruses replicate and assemble using a variety of biophysical, biochemical, and immunological methods.

Dr. Saphire’s work has been recognized at the White House with the Presidential Early Career Award in Science and Engineering, with young investigator awards from the International Congress of Antiviral Research, the American Society for Microbiology, and the MRC Centre for Virus Research in the United Kingdom. She has been awarded a Fulbright Global Scholar fellowship from the United States Department of State and a Mercator Fellowship from Deutsche Forschungsgemeinschaft, to develop international collaborations using cryoelectron microscopy to further global health.

Featured Publications

Hastie KM, Zandonatti MA, Kleinfelter LM, Heinrich ML, Rowland MM, Chandran K, Branco LM, Robinson JE, Garry RF, Saphire EO.
Saphire EO, Schendel SL, Fusco ML, Gangavarapu K, Gunn BM, Wec AZ, Halfmann PJ, Brannan JM, Herbert AS, Qiu X, Wagh K, He S, Giorgi EE, Theiler J, Pommert KBJ, Krause TB, Turner HL, Murin CD, Pallesen J, Davidson E, Ahmed R, Aman MJ, et al.
Hastie KM, Cross RW, Harkins SS, Zandonatti MA, Koval AP, Heinrich ML, Rowland MM, Robinson JE, Geisbert TW, Garry RF, Branco LM, Saphire EO
Korber B, Fischer WM, Gnanakaran S, Yoon H, Theiler J, Abfalterer W, Hengartner N, Giorgi EE, Bhattacharya T, Foley B, Hastie KM, Parker MD, Partridge DG, Evans CM, Freeman TM, de Silva TI; Sheffield COVID-19 Genomics Group, McDanal C, Perez LG, Tang H, Moon-Walker A, Whelan SP, LaBranche CC, Saphire EO, Montefiori DC.
Haoyang Li , Tierra Buck, Michelle Zandonatti, Jieyun Yin, Alex Moon-Walker, Jingru Fang, Anatoliy Kovalmegan L. Heinrich, Megan M. Rowland, Ruben Diaz Avalos, Sharon L. Schendel, Diptiben Parekh, Dawid Zyla, Adrian Enriquez, Stephanie Harkins, Brian Sullivan, Victoria Smith, Onyeka Chukwudozie, Reika Watanabe, James E. Robinson, Robert F. Garry, Luis M. Branco, Kathryn M. Hastie, Erica Ollmann Saphire

Lab Members

Marissa Acciani, Ph.D.

Postdoctoral Fellow

Mehdi Benkahla, Ph.D.

Instructor

Reika Castillon

Staff Scientist

Onyeka Chukwudozie

UCSD Graduate Student
Photo portrait of LJI Cryo-EM Core Director Ruben Alavos Diaz, Ph.D.

Ruben Diaz Avalos, Ph.D.

Cryo-EM Core Director

Theresa Gewering, Ph.D.

Postdoctoral Fellow

Chitra Hariharan, Masters

Research Tech III

Stephanie Harkins, Masters

Staff Scientist

Kathryn Hastie

Director, Antibody Discovery

Jamie Ko

Project Manager

Michelle Lawrence

Project Manager

Haoyang Li

Instructor

Michael Mor Mordekovich, Ph.D.

Postdoctoral Fellow

Gele Niemeyer

UCSD Graduate Student

Laura Odongo

Postdoctoral Fellow

Taichi Okumura

Student Volunteer

Joshua Pankrac, Ph.D.

Project Manager

Diptiben Parekh

Lab Manager/Research Tech IV

Hariom Parekh

Student Volunteer

Patrick Penalosa, M.D.

Postdoctoral Fellow

Ivette Perez, Ph.D.

Postdoctoral Fellow

Roshan Raj Rajamanickam

Research Tech I
Portrait photo of Dr. Saphire. She is wearing green and smiling at the camera

Erica Ollmann Saphire, Ph.D., MBA

Professor, President & Chief Executive Officer

Kelly Shaffer

UCSD Graduate Student

Jeremy Shek

UCSD Graduate Student

Chen Sun, Ph.D.

Postdoctoral Fellow

Elaine Thai, Ph.D.

Postdoctoral Fellow

Reika Watanabe, Ph.D.

Staff Scientist

Bomin Xie

Research Tech I

Michelle Zandonatti, Masters

Research Tech IV

Dawid Zyla, Ph.D.

Instructor

Research Projects

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From the Lab

San Diego scientists and trial participants are cautiously optimistic after early reports that Pfizer’s COVID-19 vaccine is highly effective
LJI researchers reveal a hidden side of how Ebola virus replicates inside host cells
Researchers at LJI and Columbia University uncover exactly how a neutralizing antibody blocks measles virus infection
"Bivalent" antibodies can continue to neutralize Omicron and Omicron lineages
La Jolla, CA—Erica Ollmann Saphire, Ph.D., has been appointed President and CEO of La Jolla Institute for Immunology (LJI), the Institute announced today.
Award recognizes Saphire's leadership in global effort against COVID-19
La Jolla Institute scientists team up with Brigham and Women's Hospital to guide the development of vaccines against the coronavirus family
LJI President and CEO celebrated among California’s leading life sciences innovators
A 'cocktail' of human antibodies shows promise in fighting severe SARS-CoV-2 infections
To speed inoculations, the U.S. plans to release all available vaccine doses and open access to anyone over 65. Others suggest straying from recommended doses or intentionally delaying boosters. The best way forward remains uncertain.
LJI-led Coronavirus Immunotherapeutic Consortium identifies antibody 'communities' with power to stop SARS-CoV-2 variants
A small variation has made the novel coronavirus fitter—but not more deadly
The Beacon optofluidic technology will be used to speed the identification of lifesaving treatments for deadly viruses including Ebola, Lassa and others.
The grant establishes the global Viral Immunotherapeutic Consortium to develop new treatments for Ebola, Lassa and other viral threats
Detailed structural studies provide blueprint for the development of potent therapeutics and vaccines
"She is a truly exceptional scientist, who uses molecular insights to bring together scientists and policymakers for scientific advancement and social change"
Scientists capture first look at key viral structure within infected host cells
San Diego laboratories lead vaccine innovation research through new ARPA-H program
The National Institute of Allergy and Infectious Diseases (NIAID) has awarded more than $6.4 million to Dr. Saphire to support research toward COVID-19 antibody therapeutics.
New study shows how new therapies might target Lassa and Ebola viruses
New findings emphasize the benefits of antibody cocktails over monotherapy approaches
Prebys Foundation celebrates ground-breaking female researchers
Antibody therapeutics will likely be a critical tool for protecting frontline healthcare workers and those at most risk of SARS-CoV-2 infection
Even elderly survivors show a strong, persistent immune memory
Three rare antibodies, combined in a "cocktail," are effective in fighting Lassa virus
As California emerges from Omicron, other places are again in lockdown or facing record caseloads after trying and failing to
LJI team uncovers how one odd antibody does some heavy lifting
New measles, Nipah research offers a window into viral assembly
LJI scientists, in collaboration with researchers from the Institut Pasteur in France, capture new high-resolution view of rabies virus, revealing potential vaccine targets
New study highlights VP40 as a promising therapeutic target
To treat Ebola virus infections, researchers are taking a close look at a key piece of the virus: polymerase.
Erica Ollman Saphire brings together scientific competitors to find new antibody therapeutics for COVID-19.
LJI scientists share high-resolution view of the lymphocytic choriomeningitis virus (LCMV) glycoprotein together with a neutralizing antibody

Awards & Honors

Pantheon Awardee for Academia, Non-Profit, & Research, California Life Sciences, 2023
Fulbright Global Scholar Award, 2019-2020
Mercator Fellowship, DFG, Philipps Universitaet Marburg, 2018
Eli Lilly and Company-Elanco Research Award, American Society for Microbiology, 2016
Finalist, Classy Award for the Most Innovative Nonprofits and Social Enterprises of 2016 for VIC, 2016
“Cool Woman”, Girl Scouts San Diego, 2016
William Prusoff Young Investigator Award, Int. Society for Antiviral Research, 2015
Young Investigator Award, ASBMB, 2015
Fellow, American Association for the Advancement of Science, 2015
Fellow, American Academy of Microbiology, 2014
Presidential Early Career Award in Science and Engineering, 2009
Investigator in the Pathogenesis of Infectious Disease, Burroughs Wellcome Fund, 2009-2015
ICAAC Young Investigator Award, American Society for Microbiology, 2006
Career Award in the Biomedical Sciences, Burroughs Wellcome Fund, 2003-2008
New Initiatives Award in Global Infectious Disease, Ellison Medical Foundation, 2003
Surhain Sidhu Award, 2003

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